UTRdb

Regulatory motifs in eukaryotic UTRs

UTResource collect data and analysis tool for the functional classification of 5' and 3'UTRs of eukaryotic mRNAs.

IDUTRdb
Homehttp://www.ba.itb.cnr.it/UTR/
EDAM topicTranscription
EDAM topicNucleic acid functional sites
EDAM topicSequence motifs
EDAM topicmRNA, EST or cDNA
Taxonall

Available data

Data Format Query Link
Gene annotation {UTR report} HTML Locus ID (UTR) http://utrdb.ba.itb.cnr.it/getutr/%s
Gene annotation {UTR report} HTML UTR accession http://utrdb.ba.itb.cnr.it/getutra/%s
Gene annotation {UTR gene report} HTML UTRdb taxon; Gene symbol http://utrdb.ba.itb.cnr.it/getgene/%s1/%s2
Gene annotation {UTR full report} HTML Locus ID (UTR) http://utrdb.ba.itb.cnr.it/getutr/%s/1
Gene annotation {UTR full report} HTML UTR accession http://utrdb.ba.itb.cnr.it/getutra/%s/1
Gene annotation {UTR full report} HTML UTR accession http://utrdb.ba.itb.cnr.it/getutra/BA064434/1
Gene annotation {UTR full gene report} HTML UTRdb taxon; Gene symbol http://utrdb.ba.itb.cnr.it/getgene/%s1/%s2/1

Example queries

Data Format Query Example
Gene annotation {UTR report} HTML UTR accession CR478594
Gene annotation {UTR full report} HTML UTR accession CR478594
Gene annotation {UTR full report} HTML UTR accession CR478594
Gene annotation {UTR report} HTML Locus ID (UTR) 3HSAR031240
Gene annotation {UTR full report} HTML Locus ID (UTR) 3HSAR031240
Gene annotation {UTR gene report} HTML UTRdb taxon; Gene symbol hs;MDM2
Gene annotation {UTR full gene report} HTML UTRdb taxon; Gene symbol hs;MDM2