SEED

The SEED genome comparison environment

Environment for comparative genome analysis.

IDSEED
Homehttp://www.theseed.org/
EDAM topicComparative genomics
CategoryNot available
Taxonall

Available data

Data Format Query Link
Genome metadata HTML FIG ID {Genome fig} http://www.theseed.org/linkin.cgi?genome=fig|%s
Gene annotation (functional) HTML FIG ID {PEG ID} http://www.theseed.org/linkin.cgi?id=fig|%s
Gene annotation {RNA feature} HTML FIG ID {RNA fig} http://www.theseed.org/linkin.cgi?id=fig|%s

Example queries

Data Format Query Example
Genome metadata HTML FIG ID {Genome fig} 83333.1
Gene annotation (functional) HTML FIG ID {PEG ID} 83333.1.peg.123
Gene annotation {RNA feature} HTML FIG ID {RNA fig} 83333.1.rna.1