Reactome

Reactome knowledgebase of biological pathways

Curated knowledgebase of biological pathways and processes.

IDReactome
AccDB-0088
Homehttp://www.reactome.org/
EDAM topicPathways, networks and models
CategoryEnzyme and pathway databases
Taxonall
Linkinghttp://www.reactome.org/referring2GK.html
SOAPhttp://www.reactome.org/download/index.html

Available data

Data Format Query Link
Pathway or network report HTML Pathway ID (reactome) http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=%s&ZOOM=2
Pathway or network report XML Pathway ID (reactome) http://www.reactome.org/cgi-bin/sbml_export?DB=gk_current&ID=%s
Protein report {Reactome entry} HTML Database name; Protein identifier http://www.reactome.org/cgi-bin/link?SOURCE=%s1&ID=%s2
Protein report {Reactome entry} HTML UniProt accession http://www.reactome.org/cgi-bin/link?SOURCE=UNIPROT&ID=%s
Protein report {Reactome entry} HTML ChEBI ID http://www.reactome.org/cgi-bin/link?SOURCE=CHEBI&ID=%s
Protein report {Reactome entry} HTML Compound name http://www.reactome.org/cgi-bin/link?SOURCE=COMPOUND&ID=%s
Protein report {Reactome entry} HTML GO term ID http://www.reactome.org/cgi-bin/link?SOURCE=GO&ID=%s
Protein report {Reactome entry} HTML EC number http://www.reactome.org/cgi-bin/link?SOURCE=EC&ID=%s
Protein report {Reactome entry} HTML Gene ID (NCBI) http://www.reactome.org/cgi-bin/link?SOURCE=Entrez+Gene&ID=%s
Protein report {Reactome entry} HTML Pathway ID (reactome) http://www.reactome.org/cgi-bin/link?SOURCE=Reactome&ID=%s

Example queries

Data Format Query Example
Protein report {Reactome entry} HTML UniProt accession P30304
Protein report {Reactome entry} HTML ChEBI ID 15422
Protein report {Reactome entry} HTML Compound name C00002
Protein report {Reactome entry} HTML GO term ID 0030060
Protein report {Reactome entry} HTML EC number 1.1.1.37
Protein report {Reactome entry} HTML Gene ID (NCBI) 4171
Pathway or network report HTML Pathway ID (reactome) REACT_1
Pathway or network report XML Pathway ID (reactome) REACT_1
Protein report {Reactome entry} HTML Pathway ID (reactome) REACT_1