Homologous genes from fully sequenced organisms. It allows selection of sets of homologous genes among species, and visualisation of multiple alignments and phylogenetic trees. It is useful for comparative sequence analysis, phylogeny, molecular evolution studies and to get a view of what is known about a peculiar gene family.
| ID | HOGENOM |
|---|---|
| Acc | DB-0044 |
| Home | http://pbil.univ-lyon1.fr/databases/hogenom3.html |
| EDAM topic | Nucleic acid sequence alignment |
| EDAM topic | Gene family or system |
| EDAM topic | Phylogenetics |
| EDAM topic | Comparative genomics |
| EDAM topic | Phylogenomics |
| Category | Phylogenomic databases |
| Taxon | all |
| Data | Format | Query | Link |
|---|---|---|---|
| Phylogenetic tree {Trees and families} | HTML | UniProt accession | http://pbil.univ-lyon1.fr/cgi-bin/acnuc-ac2tree?query=%s&db=HOGENOM |
| Sequence data {HOGENOM entry} | HTML | UniProt accession | http://pbil.univ-lyon1.fr/cgi-bin/acnuc-search-ac?query=%s&db=HOGENOM |
| Sequence data {HOGENOM family} | HTML | UniProt accession | http://pbil.univ-lyon1.fr/cgi-bin/acnuc-link-ac2fam?query=%s&db=HOGENOM |