A system, based on manual protein annotation, that identifies and semi-automatically annotates proteins that are part of well-conserved families or subfamilies: the HAMAP families. HAMAP is based on manually created family rules and is applied to bacterial, archaeal and plastid-encoded proteins.
| ID | HAMAP |
|---|---|
| Acc | DB-0041 |
| Home | http://www.expasy.org/sprot/hamap/ |
| EDAM topic | Proteome |
| EDAM topic | Protein families |
| Category | Family and domain databases |
| Taxon | all |
| Data | Format | Query | Link |
|---|---|---|---|
| ID list {HAMAP family members} | Text | HAMAP ID | http://www.uniprot.org/uniprot/?query=hamap+MF_%s&format=tab&columns=id |
| Sequence record {HAMAP family sequences} | uniprot | HAMAP ID | http://www.uniprot.org/uniprot/?query=hamap+MF_%s&format=txt |
| Protein report {HAMAP family rules} | HTML | HAMAP ID | http://www.expasy.org/unirule/MF_%s |
| Protein report {HAMAP family rules} | Text | HAMAP ID | http://www.expasy.org/unirule/MF_%s.txt |