CATH is a hierarchical classification of protein domain structures, which clusters proteins at four major levels: Class (C), Architecture (A), Topology (T) and Homologous superfamily (H). The boundaries and assignments for each protein domain are determined using a combination of automated and manual procedures which include computational techniques, empirical and statistical evidence, literature review and expert analysis.
| ID | CATH |
|---|---|
| Home | http://www.cathdb.info/ |
| EDAM topic | Protein domains |
| EDAM topic | Sequence clustering |
| Taxon | all |
| SOAP | http://api.cathdb.info/api/soap/dataservices/wsdl |
| Data | Format | Query | Link |
|---|---|---|---|
| CATH domain report | HTML | CATH domain ID | http://www.cathdb.info/domain/%s |
| CATH domain report | XML | CATH domain ID | http://www.cathdb.info/domain/%s?view=xml |
| Protein features (domains) {CATH chain} | HTML | Polypeptide chain ID | http://www.cathdb.info/chain/%s |
| Protein features (domains) {PDB} | HTML | PDB ID | http://www.cathdb.info/PDB/%s |
| Protein features (domains) {PDB} | XML | PDB ID | http://www.cathdb.info/PDB/%s?view=xml |
| CATH node | HTML | CATH node ID | http://www.cathdb.info/cathnode/%s |