GeneID

GeneID database of genes from NCBI RefSeq genomes

Database of genes from NCBI RefSeq genomes

IDGeneID
AccDB-0118
Homehttp://www.ncbi.nlm.nih.gov/sites/entrez?db=gene
EDAM topicGene family or system
EDAM topicGenomes
CategoryGenome annotation databases
Taxonall

Available data

Data Format Query Link
Gene annotation {GeneID gene list} HTML Identifier {Keyword} http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&term=%s
Gene annotation {GeneID gene list} HTML Sequence accession (nucleic acid) http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term=%s[accn]
Gene annotation {GeneID gene list} HTML Gene symbol http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term=%s[sym]
Gene annotation {GeneID gene list} HTML PubMed ID http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term=%s[PMID]
Gene annotation {GeneID gene list} HTML Ontology term name {GO} http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term="%s"[GO]
Gene annotation {GeneID gene list} HTML GO term ID http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term="%s"[GO]
Gene annotation {GeneID gene list} HTML Chromosome name; Species name http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term=%s1[CHR]+AND+%s2[ORGN]
Gene annotation {GeneID gene list} HTML EC number http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term=%s[EC]
Gene annotation {GeneID gene list} HTML Identifier {Unique ID} http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=search&db=gene&term=%s[uid]

Example queries

Data Format Query Example
Gene annotation {GeneID gene list} HTML Identifier {Keyword} haem
Gene annotation {GeneID gene list} HTML Sequence accession (nucleic acid) M11313
Gene annotation {GeneID gene list} HTML Gene symbol BRCA1
Gene annotation {GeneID gene list} HTML PubMed ID 11331580
Gene annotation {GeneID gene list} HTML Ontology term name {GO} cell+adhesion
Gene annotation {GeneID gene list} HTML EC number 1.9.3.1
Gene annotation {GeneID gene list} HTML Identifier {Unique ID} 4156251