Ensembl

Ensembl eukaryotic genome annotation project

Genome databases for vertebrates and other eukaryotic species.

IDEnsembl
AccDB-0023
Homehttp://www.ensembl.org/
EDAM topicGenomes
EDAM topicEukaryote
EDAM topicGenomes
CategoryGenome annotation databases
TaxonMetazoa

Available data

Data Format Query Link
Gene annotation HTML Gene ID (Ensembl) http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=%s
Sequence record FASTA format Gene ID (Ensembl); Transcript ID (Ensembl) http://www.ensembl.org/Homo_sapiens/Gene/Export?db=core;g=%s1;output=fasta;r=13:31787617-31871809;strand=feature;t=%s2;time=1244110856.85314;st=cdna;st=coding;st=peptide;st=utr5;st=utr3;st=exons;st=introns;genomic=unmasked;_format=Text

Example queries

Data Format Query Example
Sequence record FASTA format Gene ID (Ensembl); Transcript ID (Ensembl) ENSG00000139618;ENST00000380152